MANTA

Integrated analysis platform MANTA

MANTA is an integrated analysis platform that utilizes gut microbiota data and various phenotypic metadata such as diet and exercise for association analysis and visualization. MANTA aims to be an easy-to-use system for users, and allows non-bioinformatics experts to interactively extract and display data from database and analyze correlations between them. Therefore, in addition to investigating the relationship between gut microbiota data and various phenotypic data, we believe that it can be used in various ways, such as comparing the results of animal data with human data, or designing and examining the conditions of experiments. Using this MANTA system, we are conducting a variety of research, such as analyzing the relationship between lifestyle data such as diet, nutritional intake, and physical activity and gut microbiota data stored in NIBN JMD database.

Gut microbiota data includes 16S rRNA gene amplicon sequencing and shotgun metagenomic sequencing data, which can be visualized by bar charts and heat maps for each taxonomy level. It can also output phylogenetic trees created by hierarchical clustering using Bray-Curtis or UniFrac distances. In addition, for principal coordinate analysis, it is possible to display different colors based on phenotypic metadata information such as lifestyle habits. Furthermore, it is possible to show correlations between the gut microbiota and various phenotypic metadata (Pearson, Spearman). This system has a server version and a local version, MANTA basic, that can be installed on your PC. They are free to download and use.

MANTAプラットフォームのフロー図

Try out MANTA

Try out MANTA

Tutorial

Please see the tutorial below for how to use MANTA.

Tutorial of MANTA

MANTA basic

Download ready-to-use PC version.

Download softwares

User guide for MANTA basic

MANTA server version

If you want to use MANTA server version, please get the source program from GitHub or here.

How to install

GitHub MANTA Project

Source code

MANTA demo database

We have prepared MANTA demo database to evaluate the function of MANTA.
This is processed data for demonstration purposes based on actual data, and is different from the actual data.

MANTA demo database

You can download the data stored in the MANTA demo database.
You can use it to check the installation of MANTA server version or MANTA basic.